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SRX23868961: Fecal flora
1 ILLUMINA (Illumina HiSeq 1500) run: 81,286 spots, 40.6M bases, 13Mb downloads

Design: Fecal flora
Submitted by: University of South China
Study: Gut Microbiota, Glucose, Lipid, and Water-Electrolyte Metabolism in Children With Nonalcoholic Fatty Liver Disease
show Abstracthide Abstract
There is evidence that nonalcoholic fatty liver disease (NAFLD) is affected by gut microbiota, glucose,and lipid.However,the function of water-electrolyte metabolism remains undefined in children with NAFLD.Therefore,the aim of this case-control study was to better understand these interactions.The sample consisted of 145 children,aged between 7 and 16,of whom 53 had nonalcoholic fatty liver (NAFL),39 had nonalcoholic steatohepatitis (NASH),and 53 were obese and without NAFLD.These groups were matched by age,sex,and body mass index.Data were collected between June,2019 and December,2019 at the Hunan Children s Hospital,in China.Microbiome composition in fecal samples was assessed using 16S ribosomal RNA amplicon sequencing.In the clinical indices,12 glucose and lipid metabolism indices were included,and six waterelectrolyte metabolism indices were included.The results indicated that microbiomes of NAFLD children had lower alpha diversity but higher beta diversity index than the other two groups.Specifically,anti-inflammatory and probiotics abundance(e.g.,Faecalibacterium,Akkermansia,and Bifidobacterium_adolescentis)was significantly decreased in NAFLD,whereas the abundance of harmful bacteria(e.g.,Staphylococcaceae)was increased.Moreover,the abundance of butyrate-producing bacteria(e.g.,Faecalibacterium,Roseburia_inulinivorans,Roseburia_intestinalis,and Coprococcus_comes)was significantly decreased in NASH.The abundance of these bacteria were associated with glucose,lipid,and water-electrolyte metabolism(e.g.,glucose, triglyceride,cholesterol,inorganic salt,total body water,etc.),implying that the NAFLD and its severity were associated with glucose,lipid,and water-electrolyte metabolism dysbiosis.Therefore,these findings suggest that the gut microbiome,especially butyrate-producing bacteria,play an important role in the development of NAFLD in children.
Sample:
SAMN38016896 • SRS20687841 • All experiments • All runs
Library:
Name: FDMP21H010512-1a_L1_NAFL22.fq
Instrument: Illumina HiSeq 1500
Strategy: RNA-Seq
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 81,286 spots, 40.6M bases, 13Mb
Run# of Spots# of BasesSizePublished
SRR2825865681,28640.6M13Mb2024-03-07

ID:
32173200

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